Check all required columns are present in metadata

Using the req_meta_cols object.

Usage

precheck_col_req_meta(meta, verbose = FALSE, stop_on_error = FALSE)

Arguments

meta

A data frame of the metadata file

verbose

logical, if TRUE prints feedback messages to console for every test, if FALSE run silently

stop_on_error

logical, if TRUE will stop with an error if the result is "FAIL", and will throw genuine warning if result is "WARNING"

Value

a single row data frame

See also

Other precheck_col: precheck_col_invalid_meta(), precheck_col_req_data(), precheck_col_to_rows()

Examples

precheck_col_req_meta(example_meta)
#>          check result
#> 1 col_req_meta   PASS
#>                                                         message guidance_url
#> 1 All of the required columns are present in the metadata file.           NA
precheck_col_req_meta(example_meta, verbose = TRUE)
#> ✔ All of the required columns are present in the metadata file.
#>          check result
#> 1 col_req_meta   PASS
#>                                                         message guidance_url
#> 1 All of the required columns are present in the metadata file.           NA